Structure of PDB 4on0 Chain D

Receptor sequence
>4on0D (length=97) Species: 380 (Sinorhizobium fredii) [Search protein sequence]
QPLSPEKHEEAEIAAGFLSAMANPKRLLILDSLVKEEMAVGALANKVGLS
QSALSQHLSKLRAQNLVSTRRDAQTIYYSSSSDSVMKILGALSEIYG
3D structure
PDB4on0 Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR.
ChainD
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D N28 K30 R31 S57 Q61 H62 K65 R76 A78 Q79 N23 K25 R26 S52 Q56 H57 K60 R71 A73 Q74 PDBbind-CN: Kd=0.36uM
BS02 dna D V45 Q56 S57 S60 R67 Q79 T80 I81 V40 Q51 S52 S55 R62 Q74 T75 I76 PDBbind-CN: Kd=0.36uM
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4on0, PDBe:4on0, PDBj:4on0
PDBsum4on0
PubMed24733893
UniProtQ83TD2

[Back to BioLiP]