Structure of PDB 4ms8 Chain D

Receptor sequence

>4ms8D (length=239) Species: 10090 (Mus musculus) [Search protein sequence]

AVTQSPRNKVTVTGGNVTLSCRQTNSHNYMYWYRQDTGHGLRLIHYSYGA
GNLQIGDVPDGYKATRTTQEDFFLLLELASPSQTSLYFCASSDAPGQLYF
GEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV
ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPR
NHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD

3D structure

PDB

4ms8 Structural interplay between germline interactions and adaptive recognition determines the bandwidth of TCR-peptide-MHC cross-reactivity.

Chain

Resolution

1.922 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	N30 P97	N28 P95

External links

PDB	RCSB:4ms8, PDBe:4ms8, PDBj:4ms8
PDBsum	4ms8
PubMed	26523866

[Back to BioLiP]