Structure of PDB 4mby Chain D

Receptor sequence
>4mbyD (length=274) Species: 332091 (B-lymphotropic polyomavirus) [Search protein sequence]
SHMGGVEVLEVRTGPDAITQIEAYLNPRMGNNIPSEDLYGYSNSINTAFS
KASDTPNKDTLPCYSVAVIKLPLLNEDMTCTILMWEAVSVKTEVVGISSL
VNLHQGGKYIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPD
DVVAIKNMKPGNQGLDPKAKALLDKDGKYPVEVWCPDPSKNENTRYYGSF
TGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVHTNYS
ETQVWRGLPRYFNVTLRKRIVKNP
3D structure
PDB4mby Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands.
ChainD
Resolution1.48 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL D S74 K75 S50 K51
BS02 SIA D Y65 Q130 G131 H271 N273 Y274 Y41 Q105 G106 H246 N248 Y249
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:4mby, PDBe:4mby, PDBj:4mby
PDBsum4mby
PubMed24204265
UniProtP04010|VP1_POVLY Major capsid protein VP1

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