Structure of PDB 4j25 Chain D

Receptor sequence
>4j25D (length=181) Species: 160488 (Pseudomonas putida KT2440) [Search protein sequence]
ASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDIQWI
DPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHL
DRFDDDRRMVSAVLYLNEGWQPHDGGQLRMFLADGVEHDVEPVAGCLVVF
LSGEVPHEVLPAGRERLSLTGWFRRRGNDPF
3D structure
PDB4j25 Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation
ChainD
Resolution1.97 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN D H124 D126 H183 H99 D101 H157
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0008198 ferrous iron binding
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418 L-ascorbic acid binding
GO:0031543 peptidyl-proline dioxygenase activity
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0071456 cellular response to hypoxia

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4j25, PDBe:4j25, PDBj:4j25
PDBsum4j25
PubMed25197067
UniProtQ88CM1

[Back to BioLiP]