Structure of PDB 4itu Chain D

Receptor sequence
>4ituD (length=249) Species: 78245 (Xanthobacter autotrophicus Py2) [Search protein sequence]
NRLKNEVIAITGGGAGIGLAIASAALREGAKVALIDLDQGLAERSAAMLS
TGGAVAKGFGADVTKAADITAAITSAEQTIGSLTGLVNNAGIAGFGSVHD
ADAAAWDRIMAVNVTGTFLASKAALAGMLERHKGTIVNFGSVAGLVGIPT
MAAYCAAKGAIVNLTRQMAADYSGRGVRVNAVCPGTVTSTGMGQQLLGPE
VQARRLAKYPIGRFGTPEDIAEAVIFLLSDQAAFVTGAAFAVDGGMTAI
3D structure
PDB4itu Crystal structures of S-HPCDH reveal determinants of stereospecificity for R- and S-hydroxypropyl-coenzyme M dehydrogenases.
ChainD
Resolution1.6 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G18 N115 S143 Y156 K160
Catalytic site (residue number reindexed from 1) G16 N113 S141 Y154 K158
Enzyme Commision number 1.1.1.269: 2-(S)-hydroxypropyl-CoM dehydrogenase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NAI D G14 G18 I19 D38 L39 A63 D64 V65 N91 F141 S143 Y156 K160 P186 G187 T188 V189 T192 M194 G12 G16 I17 D36 L37 A61 D62 V63 N89 F139 S141 Y154 K158 P184 G185 T186 V187 T190 M192
BS02 1HS D S143 Y156 T188 R211 Y215 S141 Y154 T186 R205 Y209
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity

View graph for
Molecular Function
External links
PDB RCSB:4itu, PDBe:4itu, PDBj:4itu
PDBsum4itu
PubMed23474457
UniProtA7IQH5|HCDS3_XANP2 2-(S)-hydroxypropyl-CoM dehydrogenase 3 (Gene Name=xecE3)

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