Structure of PDB 4ijs Chain D

Receptor sequence
>4ijsD (length=232) Species: 35304 (Bunyamwera virus) [Search protein sequence]
IELEFHDVAANTSSTFDPEVAYANFKRVHTTGLSYDHIRIFYIKGREIKT
SLAKRSEWEVTLNLGGWKITVYNTNFPGNRNSPVPDDGLTLHRLSGFLAR
YLLEKMLKVSEPEKLIIKSKIINPLAEKNGITWNDGEEVYLSFFPGSEMF
LGTFRFYPLAIGIYKVQRKEMEPKYLEKTMRQRYMGLEAATWTVSKLTEV
QSALTVVSSLGWKKTNVSAAARDFLAKFGINM
3D structure
PDB4ijs Bunyamwera virus possesses a distinct nucleocapsid protein to facilitate genome encapsidation
ChainD
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D S15 F17 D18 P19 R47 K50 T75 T91 I123 P125 L126 E128 Y176 K179 R182 Q183 R184 S14 F16 D17 P18 R46 K49 T74 T90 I122 P124 L125 E127 Y175 K178 R181 Q182 R183
Gene Ontology
Biological Process
GO:0039657 symbiont-mediated suppression of host gene expression
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4ijs, PDBe:4ijs, PDBj:4ijs
PDBsum4ijs
PubMed23569257
UniProtP16495|NCAP_BUNYW Nucleoprotein (Gene Name=N)

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