Structure of PDB 4gjj Chain D

Receptor sequence
>4gjjD (length=419) Species: 316 (Stutzerimonas stutzeri) [Search protein sequence]
EFRIAQDVVARENDRRASALKEDYEALGANLARRGVDIEAVTAKVEKFFV
AVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLNI
PWDKADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTNAA
TRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNFPGQSNFTRAFERYLSA
MAEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCL
VDLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGAIEPYRL
FLVFNELVDAEARGVKGFHPAHMIDQSHNVTDPIESLINSANEIRRAYAQ
ALLVDRAALSGYQEDNDALMATETLKRAYRTDVEPILAEARRRTGGAVDP
VATYRASGYRARVAAERPA
3D structure
PDB4gjj Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
ChainD
Resolution2.38 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.3.1.14: L-rhamnose isomerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN D E219 D254 H257 H281 D327 E217 D252 H255 H279 D325
BS02 MN D K221 D254 H257 D289 K219 D252 H255 D287
BS03 AOS D W57 W179 E219 K221 H257 H281 D327 W55 W177 E217 K219 H255 H279 D325
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4gjj, PDBe:4gjj, PDBj:4gjj
PDBsum4gjj
PubMed23772372
UniProtQ75WH8

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