Structure of PDB 4gji Chain D

Receptor sequence
>4gjiD (length=419) Species: 316 (Stutzerimonas stutzeri) [Search protein sequence]
EFRIAQDVVARENDRRASALKEDYEALGANLARRGVDIEAVTAKVEKFFV
AVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLNI
PWDKADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTNAA
TRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNFPGQSNFTRAFERYLSA
MAEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCL
VDLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGAIEPYRL
FLVFNELVDAEARGVKGFHPAHMIDQSHNVTDPIESLINSANEIRRAYAQ
ALLVDRAALSGYQEDNDALMATETLKRAYRTDVEPILAEARRRTGGAVDP
VATYRASGYRARVAAERPA
3D structure
PDB4gji Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
ChainD
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.3.1.14: L-rhamnose isomerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RM4 D W179 E219 K221 H257 H281 D327 W177 E217 K219 H255 H279 D325
BS02 RNS D W57 W179 E219 K221 H257 H281 D327 W55 W177 E217 K219 H255 H279 D325
BS03 RAM D L309 F320 L307 F318
BS04 MN D E219 D254 H281 D327 E217 D252 H279 D325
BS05 MN D K221 H257 D289 K219 H255 D287
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4gji, PDBe:4gji, PDBj:4gji
PDBsum4gji
PubMed23772372
UniProtQ75WH8

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