Structure of PDB 4g8l Chain D

Receptor sequence
>4g8lD (length=294) Species: 9606 (Homo sapiens) [Search protein sequence]
AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS
REDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE
CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTGGATALMDAAEKG
HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG
ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL
AVELKLKKIAELLCKRGASTGDLVMTARRNYDHSLVKVLLSHGA
3D structure
PDB4g8l Innate Immune Messenger 2-5A Tethers Human RNase L into Active High-Order Complexes.
ChainD
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.26.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 25A D M306 R309 R310 Y312 M275 R278 R279 Y281 BindingDB: IC50=20nM,EC50=0.210000nM
BS02 25A D E55 E57 G58 W60 N65 Q68 K89 Y124 F126 E131 Y135 R155 E35 E37 G38 W40 N45 Q48 K69 Y104 F106 E111 Y115 R135 BindingDB: IC50=20nM,EC50=0.210000nM
External links
PDB RCSB:4g8l, PDBe:4g8l, PDBj:4g8l
PDBsum4g8l
PubMed23084743
UniProtQ05823|RN5A_HUMAN 2-5A-dependent ribonuclease (Gene Name=RNASEL)

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