Structure of PDB 4dmm Chain D

Receptor sequence
>4dmmD (length=237) Species: 1140 (Synechococcus elongatus PCC 7942 = FACHB-805) [Search protein sequence]
LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAI
AAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLL
RMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP
GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATKLLEVIPLGR
YGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA
3D structure
PDB4dmm 3-oxoacyl-[acyl-carrier-protein] reductase from Synechococcus elongatus PCC 7942 in complex with NADP
ChainD
Resolution2.38 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G19 S145 Q155 Y158 K162
Catalytic site (residue number reindexed from 1) G16 S142 Q152 Y155 K159
Enzyme Commision number 1.1.1.100: 3-oxoacyl-[acyl-carrier-protein] reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAP D G15 S17 R18 G19 I20 A40 S41 S42 D66 V67 N93 A94 L116 I143 S145 Y158 K162 P188 G189 I191 T193 G12 S14 R15 G16 I17 A37 S38 S39 D63 V64 N90 A91 L113 I140 S142 Y155 K159 P185 G186 I188 T190
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0016491 oxidoreductase activity
GO:0051287 NAD binding
Biological Process
GO:0006633 fatty acid biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:4dmm, PDBe:4dmm, PDBj:4dmm
PDBsum4dmm
PubMed
UniProtQ31QF3

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