Structure of PDB 4d7e Chain D

Receptor sequence
>4d7eD (length=300) Species: 247156 (Nocardia farcinica IFM 10152) [Search protein sequence]
ETLLVVGAGPKALAVAAKSHVLRQLGLSAPRVIAVEAHAVGGNWLASGGW
TDGRHRLGTSPEKDIGFPYHSTWARGHNREINEAMMAFSWTSFLVEHGTY
AEWIDRGRPSPQHHVWAKYLQWVARKIDLELVLGKVRTIRQGWSVEVAGT
TELEADGLMITGPGQSTKALSIAEFWDLAVIGETAGSALDELVRHYFENS
LFSDPTKWNALSIQERRDVIRRTDQPLWFLDLFDSESADLLELAVGGPLT
QQRIESSIGYDLAVTGLGAKLYLPNMAALAQGPGFPNLSCLGELSDRVLR
3D structure
PDB4d7e An Unprecedented Nadph Domain Conformation in Lysine Monooxygenase Nbtg Provides Insights Into Uncoupling of Oxygen Consumption from Substrate Hydroxylation.
ChainD
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.13.59: L-lysine N(6)-monooxygenase (NADPH).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD D G8 G10 P11 K12 E37 A38 N44 W45 G59 T60 V137 T173 G174 Q177 T217 N400 L401 G7 G9 P10 K11 E36 A37 N43 W44 G58 T59 V136 T161 G162 Q165 T184 N287 L288
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0047091 L-lysine 6-monooxygenase (NADPH) activity
Biological Process
GO:0009058 biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4d7e, PDBe:4d7e, PDBj:4d7e
PDBsum4d7e
PubMed25802330
UniProtQ5Z1T5

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