Structure of PDB 4bpd Chain D

Receptor sequence
>4bpdD (length=108) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
AGYSWKGLRAAWINEAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVM
LVMIVELLNSAIEAVVDRIGSEYHELSGRAKDLGSAAVLIAIIDAVITWA
ILLWSHFG
3D structure
PDB4bpd Cell-Free Expression and in Meso Crystallisation of an Integral Membrane Kinase for Structure Determination.
ChainD
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.107: diacylglycerol kinase (ATP).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 78M D V36 L40 V23 L27
BS02 ZN D E28 E76 E15 E63
BS03 78M D W25 Q33 W12 Q20
Gene Ontology
Molecular Function
GO:0004143 ATP-dependent diacylglycerol kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006654 phosphatidic acid biosynthetic process
GO:0008610 lipid biosynthetic process
GO:0008654 phospholipid biosynthetic process
GO:0009411 response to UV
GO:0016310 phosphorylation
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Cellular Component
External links
PDB RCSB:4bpd, PDBe:4bpd, PDBj:4bpd
PDBsum4bpd
PubMed25012698
UniProtP0ABN1|KDGL_ECOLI Diacylglycerol kinase (Gene Name=dgkA)

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