Structure of PDB 3zoy Chain D

Receptor sequence
>3zoyD (length=79) Species: 915 (Nitrosomonas europaea) [Search protein sequence]
DADLAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGS
SGVWGQIPMPPVNVSDADAKALADWILTL
3D structure
PDB3zoy Structural Characterization of Nitrosomonas Europaea Cytochrome C-552 Variants with Marked Differences in Electronic Structure.
ChainD
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.7.2.2: nitrite reductase (cytochrome; ammonia-forming).
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 HEC D N8 C10 C13 H14 G22 P23 I28 Y32 Y41 K45 I46 S50 S51 G52 V53 W54 I57 M59 N8 C10 C13 H14 G22 P23 I28 Y32 Y41 K45 I46 S50 S51 G52 V53 W54 I57 M59
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function

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Cellular Component
External links
PDB RCSB:3zoy, PDBe:3zoy, PDBj:3zoy
PDBsum3zoy
PubMed23908017
UniProtP95339|CY552_NITEU Cytochrome c-552 (Gene Name=cyt)

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