Structure of PDB 3zla Chain D

Receptor sequence
>3zlaD (length=228) Species: 35304 (Bunyamwera virus) [Search protein sequence]
GSMIELEFHDVTFDPEVAYANFKRVHTTGLSYDHIRIFYIKGREIKTSLA
KRSEWEVTLNLGGWKITVYNTNFPGNRNNPVPDDGLTLHRLSGFLARYLL
EKMLKVSEPEKLIIKSKIINPLAEKNGITWNDGEEVYLSFFPGSEMFLGT
FRFYPLAIGIYKVQRKEMEPKYLEKTMRQRYMGLEAATWTVSKLTEVQSA
LTVVSSLGWKKTNVSAAARDFLAKFGIN
3D structure
PDB3zla Nucleocapsid Protein Structures from Orthobunyaviruses Reveal Insight Into Ribonucleoprotein Architecture and RNA Polymerization.
ChainD
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D I44 R47 K50 T75 R81 N82 L126 K175 Y176 K179 R182 Q183 R184 N217 I40 R43 K46 T71 R77 N78 L122 K171 Y172 K175 R178 Q179 R180 N213 PDBbind-CN: Kd=62.9nM
Gene Ontology
Biological Process
GO:0039657 symbiont-mediated suppression of host gene expression
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3zla, PDBe:3zla, PDBj:3zla
PDBsum3zla
PubMed23595147
UniProtP16495|NCAP_BUNYW Nucleoprotein (Gene Name=N)

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