Structure of PDB 3w39 Chain D

Receptor sequence
>3w39D (length=277) Species: 9606 (Homo sapiens) [Search protein sequence]
MGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRA
PWIEQEGPEYWDRETQISKTNTQTYRENLRIALRYYNQSEAGSHTWQTMY
GCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEA
AREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHEA
TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVV
PSGEEQRYTCHVQHEGLPKPLTLRWEP
3D structure
PDB3w39 Distinct HIV-1 Escape Patterns Selected by Cytotoxic T Cells with Identical Epitope Specificity
ChainD
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y10 E64 I67 N71 T74 Y75 E77 N78 I81 Y85 W96 Y100 Y117 Y124 T144 Q156 L157 Y160 W168 Y10 E64 I67 N71 T74 Y75 E77 N78 I81 Y85 W96 Y100 Y117 Y124 T144 Q156 L157 Y160 W168
External links
PDB RCSB:3w39, PDBe:3w39, PDBj:3w39
PDBsum3w39
PubMed23236061
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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