Structure of PDB 3vyq Chain D
Receptor sequence
>3vyqD (length=63) Species:
10090
(Mus musculus) [
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HKPVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNG
ETFLKPEDFNFTV
3D structure
PDB
3vyq
Structural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4
Chain
D
Resolution
2.525 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
3.2.2.-
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
D
R84 S86 K88 T89 R106
R15 S17 K19 T20 R37
Gene Ontology
Molecular Function
GO:0003677
DNA binding
View graph for
Molecular Function
External links
PDB
RCSB:3vyq
,
PDBe:3vyq
,
PDBj:3vyq
PDBsum
3vyq
PubMed
23316048
UniProt
Q9Z2D7
|MBD4_MOUSE Methyl-CpG-binding domain protein 4 (Gene Name=Mbd4)
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