Structure of PDB 3vr1 Chain D

Receptor sequence
>3vr1D (length=516) Species: 883 (Nitratidesulfovibrio vulgaris str. 'Miyazaki F') [Search protein sequence]
MSSRLEREAARRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKA
ARHATSDWMAMERERGISVTTSVMQFPYRDRVVNLLDTPGHQDFSEDTYR
VLTAVDSALVVIDAAKGVEAQTRKLMDVCRMRATPVMTFVNKMDREALHP
LDVMADIEQHLQIECAPMTWPIGMGSSFKGTYDLLHKQLHLFSAIQSGIV
IHGADDPQLDEYLGDQAEQLRMDLALLEEAGTPFDEERYLKGELTPVFFG
SAINNFGVREMLDMFVEFAPGPQPRPAATRVVEPGEEAFTGVVFKIQARM
AFLRICSGTFTRGMRLKHHRTGKDVTVANATIFMAQDRTGVEEAFPGDII
GIPNHGTIKIGDTFTESKEVLKFVGIPNFAPEHFRRVRLKNPLKAKQLQK
GLEQLAEEGAVQLFRPLVNNDYILGAVGVLQFDVIVARLADEYGVDAVYE
GVSTHTARWVYCEDKKIFADFQDYHRGELAVDAEGALAYLAPNPWRLESA
MERYPKVEFRTTREIS
3D structure
PDB3vr1 Crystal structure analysis of the translation factor RF3 (release factor 3)
ChainD
Resolution3.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D22
Catalytic site (residue number reindexed from 1) D22
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 G4P D D22 G24 K25 T26 T27 K49 H91 N141 K142 D144 S256 I258 D22 G24 K25 T26 T27 K49 H91 N141 K142 D144 S251 I253
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0016149 translation release factor activity, codon specific
GO:0016150 translation release factor activity, codon nonspecific
Biological Process
GO:0006412 translation
GO:0006415 translational termination
GO:0006449 regulation of translational termination
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Cellular Component
External links
PDB RCSB:3vr1, PDBe:3vr1, PDBj:3vr1
PDBsum3vr1
PubMed22975312
UniProtB8DIL5|RF3_NITV9 Peptide chain release factor 3 (Gene Name=prfC)

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