Structure of PDB 3pdu Chain D

Receptor sequence

>3pduD (length=287) Species: 35554 (Geobacter sulfurreducens) [Search protein sequence]

MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASS
PAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDE
TSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPA
FAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGG
QLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDR
LGQPLHGAATANESFKRARAAGHADEDFAAVFRVLEA

3D structure

PDB

3pdu Structural characterization of a beta-hydroxyacid dehydrogenase from Geobacter sulfurreducens and Geobacter metallireducens with succinic semialdehyde reductase activity.

Chain

Resolution

1.89 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	GOL	D	E246 R250	E246 R250
BS02	GOL	D	R242 E246	R242 E246
BS03	NAP	D	G10 I11 M12 N31 R32 N33 K36 M64 L65 A66 A70 T96 V121 G123 T124 K171 S231 F232 P233 H236 K239	G10 I11 M12 N31 R32 N33 K36 M64 L65 A66 A70 T96 V121 G123 T124 K171 S231 F232 P233 H236 K239
BS04	GOL	D	E227 F228 P229 E276	E227 F228 P229 E276

Gene Ontology

	Molecular Function
GO:0000166	nucleotide binding
GO:0016491	oxidoreductase activity
GO:0050661	NADP binding
GO:0051287	NAD binding

	Biological Process
GO:0016054	organic acid catabolic process

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:3pdu, PDBe:3pdu, PDBj:3pdu
PDBsum	3pdu
PubMed	24878278
UniProt	Q74DE4

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