Structure of PDB 3pdi Chain D

Receptor sequence
>3pdiD (length=432) Species: 322710 (Azotobacter vinelandii DJ) [Search protein sequence]
IINRNKALAVSPLKASQTMGAALAILGLARSMPLFHGSQGCTAFAKVFFV
RHFREPVPLQTTAMDQVSSVMGADENVVEALKTICERQNPSVIGLLTTGL
SETQGCDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGCFESGFAAAVKAI
VETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIESFGLRPLLIP
DLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA
LAERTGVPDRRFGMLYGLDAVDAWLMALAEISGNPVPDRYKRQRAQLQDA
MLDTHFMLSSARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVD
SPLPSVRVGDLEDLEHAARAGQAQLVIGNSHALASARRLGVPLLRAGFPQ
YDLLGGFQRCWSGYRGSSQVLFDLANLLVEHH
3D structure
PDB3pdi Structure of Precursor-Bound NifEN: A Nitrogenase FeMo Cofactor Maturase/Insertase.
ChainD
Resolution2.4 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) G102 T106
Catalytic site (residue number reindexed from 1) G99 T103
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 D G43 C44 F47 G40 C41 F44
Gene Ontology
Molecular Function
GO:0016163 nitrogenase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0009399 nitrogen fixation
GO:0065003 protein-containing complex assembly

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3pdi, PDBe:3pdi, PDBj:3pdi
PDBsum3pdi
PubMed21212358
UniProtC1DH04

[Back to BioLiP]