Structure of PDB 3p9m Chain D

Receptor sequence
>3p9mD (length=277) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRWEPP
3D structure
PDB3p9m Affinity thresholds for naive CD8+ CTL activation by peptides and engineered influenza A viruses
ChainD
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 E24 E63 K66 N70 S73 F74 D77 Y84 Y116 T143 K146 W147 R155 Y159 W167 Y171 Y7 E24 E63 K66 N70 S73 F74 D77 Y84 Y116 T143 K146 W147 R155 Y159 W167 Y171
External links
PDB RCSB:3p9m, PDBe:3p9m, PDBj:3p9m
PDBsum3p9m
PubMed22039305
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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