Structure of PDB 3p13 Chain D

Receptor sequence
>3p13D (length=129) Species: 93061 (Staphylococcus aureus subsp. aureus NCTC 8325) [Search protein sequence]
AVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDV
LATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKS
NLAHPLNKGNIRTGETTPYSNIALESNVT
3D structure
PDB3p13 Crystal structure of Sa240: A ribose pyranase homolog with partial active site from Staphylococcus aureus
ChainD
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.4.99.62: D-ribose pyranase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RIP D D30 G32 H101 P124 Y125 D24 G26 H95 P118 Y119
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0016866 intramolecular transferase activity
GO:0016872 intramolecular lyase activity
GO:0048029 monosaccharide binding
GO:0062193 D-ribose pyranase activity
Biological Process
GO:0005996 monosaccharide metabolic process
GO:0019303 D-ribose catabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3p13, PDBe:3p13, PDBj:3p13
PDBsum3p13
PubMed21276853
UniProtQ2G1A5|RBSD_STAA8 D-ribose pyranase (Gene Name=rbsD)

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