Structure of PDB 3nm9 Chain D

Receptor sequence
>3nm9D (length=73) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSE
WEAKAAKAKDDYDRAVKEFEANG
3D structure
PDB3nm9 Structural analysis of HMGD-DNA complexes reveals influence of intercalation on sequence selectivity and DNA bending.
ChainD
Resolution2.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D Y12 T33 K37 R44 Y11 T32 K36 R43
BS02 dna D K6 R7 R20 V32 K5 R6 R19 V31
BS03 dna D R7 P8 R6 P7
External links
PDB RCSB:3nm9, PDBe:3nm9, PDBj:3nm9
PDBsum3nm9
PubMed20800069
UniProtQ05783|HMGD_DROME High mobility group protein D (Gene Name=HmgD)

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