Structure of PDB 3n4q Chain D

Receptor sequence
>3n4qD (length=214) Species: 10363 (Human herpesvirus 5 strain Towne) [Search protein sequence]
LITDQSREEFDILRYSTLNTNAYDYFGKTLYVYLDPASGTGVAAVGAYRH
QFLIYGLEHFFESSEVAIAECAAHMIISVLSLHPYLDELRIAVEGNTNQA
AAVRIACLIRQSVQSSTLIRVLFYHTPDQNHIEQPFYLMGRDKALAVEQF
ISRFNSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHRDDLIIAVIMAT
YLCDDIHAIRFRVS
3D structure
PDB3n4q Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain.
ChainD
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MN D D463 D651 D35 D191
BS02 MN D D463 E534 D35 E94
BS03 MG D D439 E618 D11 E178
Gene Ontology
Biological Process
GO:0051276 chromosome organization

View graph for
Biological Process
External links
PDB RCSB:3n4q, PDBe:3n4q, PDBj:3n4q
PDBsum3n4q
PubMed20805464
UniProtP16732|TRM3_HCMVA Tripartite terminase subunit 3 (Gene Name=TRM3)

[Back to BioLiP]