Structure of PDB 3lnd Chain D

Receptor sequence
>3lndD (length=202) Species: 10090 (Mus musculus) [Search protein sequence]
SWMANQFFLLEEYTGSDYQYVGKLHSDQDRGDGSLKYILSGDGAGDLFII
NENTGDIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDIN
DNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ
GQPYFSVESETGIIKTALLNREQYQVVIQAKDMGGQMGGLSGTTTVNITL
TD
3D structure
PDB3lnd Two-step adhesive binding by classical cadherins.
ChainD
Resolution2.82 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D N100 N102 D132 D134 S141 D187 N100 N102 D132 D134 S141 D182
BS02 CA D E11 E66 D98 I99 D101 D134 E11 E66 D98 I99 D101 D134
BS03 CA D E11 E12 D64 E66 D101 E11 E12 D64 E66 D101
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609 cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Cellular Component
External links
PDB RCSB:3lnd, PDBe:3lnd, PDBj:3lnd
PDBsum3lnd
PubMed20190754
UniProtP97326|CADH6_MOUSE Cadherin-6 (Gene Name=Cdh6)

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