Structure of PDB 3lm8 Chain D

Receptor sequence
>3lm8D (length=212) Species: 1423 (Bacillus subtilis) [Search protein sequence]
KTINIVAGGPKNLIPDLTGYTDEHTLWIGVDKGTVTLLDAGIIPVEAFGD
FDSITEQERRRIEKAAPALHVYQADQTDLDLALDWALEKQPDIIQIFGIT
GGRADHFLGNIQLLYKGVKTNIKIRLIDKQNHIQMFPPGEYDIEKDENKR
YISFIPFSEDIHELTLTGFKYPLNNCHITLGSTLCISNELIHSRGTFSFV
KGILIMIRSTDL
3D structure
PDB3lm8 Northeast Structural Genomics Consortium Target SR677
ChainD
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.6.2: thiamine diphosphokinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 VIB D Y174 L187 C188 I189 S190 Y171 L184 C185 I186 S187
Gene Ontology
Molecular Function
GO:0004788 thiamine diphosphokinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0030975 thiamine binding
Biological Process
GO:0006772 thiamine metabolic process
GO:0009229 thiamine diphosphate biosynthetic process
GO:0016310 phosphorylation
GO:0042723 thiamine-containing compound metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3lm8, PDBe:3lm8, PDBj:3lm8
PDBsum3lm8
PubMed
UniProtO34664|THIN_BACSU Thiamine pyrophosphokinase (Gene Name=thiN)

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