Structure of PDB 3krf Chain D

Receptor sequence
>3krfD (length=295) Species: 34256 (Mentha x piperita) [Search protein sequence]
MFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPML
CIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTN
HMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSE
GLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKE
EEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPK
LIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN
3D structure
PDB3krf Structure of a heterotetrameric geranyl pyrophosphate synthase from mint (Mentha piperita) reveals intersubunit regulation
ChainD
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.1: dimethylallyltranstransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 IPE D G43 K44 R47 H76 R95 F217 D221 G43 K44 R47 H76 R95 F217 D221
BS02 DST D S79 D83 R94 L152 Q156 K180 K235 S79 D83 R94 L152 Q156 K180 K235
BS03 MG D D83 D89 D83 D89
BS04 MG D D83 D89 D83 D89
Gene Ontology
Molecular Function
GO:0004659 prenyltransferase activity
Biological Process
GO:0008299 isoprenoid biosynthetic process

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:3krf, PDBe:3krf, PDBj:3krf
PDBsum3krf
PubMed20139160
UniProtQ9SBR3

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