Structure of PDB 3klo Chain D

Receptor sequence
>3kloD (length=173) Species: 686 (Vibrio cholerae O1 biovar El Tor) [Search protein sequence]
ENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRS
IQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWN
NLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTH
LHNVFKKINAKNRLQALIWAKNN
3D structure
PDB3klo Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP.
ChainD
Resolution2.802 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C2E D W131 T133 R134 W128 T130 R131 Manual survey: Kd=3.18uM (20150502)
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0000976 transcription cis-regulatory region binding
GO:0001216 DNA-binding transcription activator activity
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045893 positive regulation of DNA-templated transcription
Cellular Component
GO:0032993 protein-DNA complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3klo, PDBe:3klo, PDBj:3klo
PDBsum3klo
PubMed20150502
UniProtQ9KKZ8

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