Structure of PDB 3j95 Chain D

Receptor sequence
>3j95D (length=479) Species: 10029 (Cricetulus griseus) [Search protein sequence]
KMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGK
TLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL
GANSGLHIIIFDEIDAIDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLID
EALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA
VETKNFSGAELEGLVRAAQSTAMNRHIFLASLENDIKPEDYASYIMNGII
KWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAE
ESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERL
LDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML
NAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIK
KLLMLIEMSLQMDPEYRVRKFLALLREEG
3D structure
PDB3j95 Mechanistic insights into the recycling machine of the SNARE complex.
ChainD
Resolution7.6 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K549 T550 D603 D604 K631 K708
Catalytic site (residue number reindexed from 1) K291 T292 D345 D346 K373 K450
Enzyme Commision number 3.6.4.6: vesicle-fusing ATPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP D Y502 I503 G506 I507 H546 S547 G548 K549 T550 A551 Y244 I245 G248 I249 H288 S289 G290 K291 T292 A293
Gene Ontology
Molecular Function
GO:0000149 SNARE binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0017075 syntaxin-1 binding
GO:0019901 protein kinase binding
GO:0019905 syntaxin binding
GO:0030165 PDZ domain binding
GO:0035255 ionotropic glutamate receptor binding
GO:0042802 identical protein binding
GO:0044877 protein-containing complex binding
GO:0046872 metal ion binding
GO:0140545 ATP-dependent protein disaggregase activity
Biological Process
GO:0001921 positive regulation of receptor recycling
GO:0006813 potassium ion transport
GO:0006886 intracellular protein transport
GO:0006891 intra-Golgi vesicle-mediated transport
GO:0015031 protein transport
GO:0035494 SNARE complex disassembly
GO:0043001 Golgi to plasma membrane protein transport
GO:0045732 positive regulation of protein catabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005794 Golgi apparatus
GO:0005795 Golgi stack
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0030496 midbody

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3j95, PDBe:3j95, PDBj:3j95
PDBsum3j95
PubMed25581794
UniProtP18708|NSF_CRIGR Vesicle-fusing ATPase (Gene Name=NSF)

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