Structure of PDB 3j94 Chain D

Receptor sequence
>3j94D (length=485) Species: 10029 (Cricetulus griseus) [Search protein sequence]
KMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGK
TLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL
GANSGLHIIIFDEIDAIDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLID
EALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA
VETKNFSGAELEGLVRAAQSTAMNRHIFLASLENDIKPAFGTNQEDYASY
IMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTAL
AAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVV
DDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVL
QEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKK
VWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG
3D structure
PDB3j94 Mechanistic insights into the recycling machine of the SNARE complex.
ChainD
Resolution4.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K549 T550 D603 D604 K631 K708
Catalytic site (residue number reindexed from 1) K297 T298 D351 D352 K379 K456
Enzyme Commision number 3.6.4.6: vesicle-fusing ATPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D Y502 I503 M504 N505 G506 I507 I508 P544 P545 H546 S547 G548 K549 T550 A551 K708 Y250 I251 M252 N253 G254 I255 I256 P292 P293 H294 S295 G296 K297 T298 A299 K456
BS02 ATP D G221 G263 G265 K266 T267 L268 I406 G438 A439 G5 G47 G49 K50 T51 L52 I176 G208 A209
Gene Ontology
Molecular Function
GO:0000149 SNARE binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0017075 syntaxin-1 binding
GO:0019901 protein kinase binding
GO:0019905 syntaxin binding
GO:0030165 PDZ domain binding
GO:0035255 ionotropic glutamate receptor binding
GO:0042802 identical protein binding
GO:0044877 protein-containing complex binding
GO:0046872 metal ion binding
GO:0140545 ATP-dependent protein disaggregase activity
Biological Process
GO:0001921 positive regulation of receptor recycling
GO:0006813 potassium ion transport
GO:0006886 intracellular protein transport
GO:0006891 intra-Golgi vesicle-mediated transport
GO:0015031 protein transport
GO:0035494 SNARE complex disassembly
GO:0043001 Golgi to plasma membrane protein transport
GO:0045732 positive regulation of protein catabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005794 Golgi apparatus
GO:0005795 Golgi stack
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0030496 midbody

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3j94, PDBe:3j94, PDBj:3j94
PDBsum3j94
PubMed25581794
UniProtP18708|NSF_CRIGR Vesicle-fusing ATPase (Gene Name=NSF)

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