Structure of PDB 3i6g Chain D

Receptor sequence
>3i6gD (length=275) Species: 9606 (Homo sapiens) [Search protein sequence]
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGQEQRYTCHVQHEGLPKPLTLRWE
3D structure
PDB3i6g The membrane protein of severe acute respiratory syndrome coronavirus acts as a dominant immunogen revealed by a clustering region of novel functionally and structurally defined cytotoxic T-lymphocyte epitopes.
ChainD
Resolution2.201 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D H151 E154 H151 E154
BS02 peptide D Y7 F9 E63 R65 K66 V67 T73 V76 D77 T80 Y84 Y99 Y116 T143 K146 W147 V152 Q155 L156 Y159 W167 Y171 Y7 F9 E63 R65 K66 V67 T73 V76 D77 T80 Y84 Y99 Y116 T143 K146 W147 V152 Q155 L156 Y159 W167 Y171
External links
PDB RCSB:3i6g, PDBe:3i6g, PDBj:3i6g
PDBsum3i6g
PubMed20831383
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

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