Structure of PDB 3dcq Chain D

Receptor sequence
>3dcqD (length=114) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVI
GTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDN
DYNDAVVVINWPLG
3D structure
PDB3dcq Inhibition and dispersion of Pseudomonas aeruginosa biofilms by glycopeptide dendrimers targeting the fucose-specific lectin LecB.
ChainD
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA D E95 D99 D101 D104 E95 D99 D101 D104
BS02 CA D N21 D101 N103 D104 N21 D101 N103 D104
BS03 2G0 D S22 S23 D96 D99 D101 D104 S22 S23 D96 D99 D101 D104 MOAD: ic50=5.94uM
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0044010 single-species biofilm formation

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Molecular Function
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Biological Process
External links
PDB RCSB:3dcq, PDBe:3dcq, PDBj:3dcq
PDBsum3dcq
PubMed19101469
UniProtQ9HYN5

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