Structure of PDB 3d9f Chain D

Receptor sequence
>3d9fD (length=430) Species: 5507 (Fusarium oxysporum) [Search protein sequence]
VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYRE
AVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGL
MPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQ
TTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPN
VDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFH
VPHENLLCTPGLKAQGLVETAFAMAAALVGAMAIGTARAAFEEALVFAKS
DTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVK
LEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLF
DGGNIGLRRRQMQRVMALEDYEPWAATYGS
3D structure
PDB3d9f Crystal structures of intermediates in the nitroalkane oxidase reaction.
ChainD
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H133 S134 D402
Catalytic site (residue number reindexed from 1) H132 S133 D401
Enzyme Commision number 1.7.3.1: nitroalkane oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD D R304 I310 H313 V316 K375 A376 V377 G378 M379 R303 I309 H312 V315 K374 A375 V376 G377 M378
BS02 FAD D L131 H133 S134 G138 A140 N141 W169 P170 S171 F401 D402 G403 G404 G407 L130 H132 S133 G137 A139 N140 W168 P169 S170 F400 D401 G402 G403 G406
BS03 N6C D V95 L99 F401 D402 V94 L98 F400 D401 MOAD: Ki=130mM
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003995 acyl-CoA dehydrogenase activity
GO:0016491 oxidoreductase activity
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 flavin adenine dinucleotide binding
GO:0052664 nitroalkane oxidase activity
GO:0071949 FAD binding
Biological Process
GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0046359 butyrate catabolic process
GO:0098754 detoxification

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Molecular Function
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Biological Process
External links
PDB RCSB:3d9f, PDBe:3d9f, PDBj:3d9f
PDBsum3d9f
PubMed19265437
UniProtQ8X1D8|NAO_FUSOX Nitroalkane oxidase

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