Structure of PDB 3bwd Chain D

Receptor sequence
>3bwdD (length=156) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
RFIKCVTVGDGAVGKTCLLISYTSNTFPFSANVVLGLWDTAGEDYNRLRP
LSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDL
RDDKQFFIDHAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAI
RVVLQP
3D structure
PDB3bwd Purification, crystallization and preliminary X-ray diffraction analysis of the plant Rho protein ROP5
ChainD
Resolution1.53 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GDP D A16 G18 K19 T20 C21 F31 K119 D121 L122 S159 K161 A12 G14 K15 T16 C17 F27 K97 D99 L100 S135 K137
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
Biological Process
GO:0007264 small GTPase-mediated signal transduction
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3bwd, PDBe:3bwd, PDBj:3bwd
PDBsum3bwd
PubMed
UniProtQ9SBJ6|RAC6_ARATH Rac-like GTP-binding protein ARAC6 (Gene Name=ARAC6)

[Back to BioLiP]