Structure of PDB 2zl4 Chain D

Receptor sequence
>2zl4D (length=173) Species: 210 (Helicobacter pylori) [Search protein sequence]
DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG
GVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHS
RIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKD
TDRDFYMSAKEAKEYGLIDKVLQ
3D structure
PDB2zl4 The structural basis for the activation and peptide recognition of bacterial ClpP
ChainD
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.92: endopeptidase Clp.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D G69 G70 I72 A99 M100 H124 P126 L127 G50 G51 I53 A80 M81 H105 P107 L108
Gene Ontology
Molecular Function
GO:0004176 ATP-dependent peptidase activity
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
GO:0051117 ATPase binding
Biological Process
GO:0006508 proteolysis
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins
Cellular Component
GO:0005737 cytoplasm
GO:0009368 endopeptidase Clp complex

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External links
PDB RCSB:2zl4, PDBe:2zl4, PDBj:2zl4
PDBsum2zl4
PubMed18468623
UniProtP56156|CLPP_HELPY ATP-dependent Clp protease proteolytic subunit (Gene Name=clpP)

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