Structure of PDB 2yaj Chain D

Receptor sequence
>2yajD (length=86) Species: 1548 (Clostridium scatologenes) [Search protein sequence]
MRHYDCKNYINLDCEKGLCALTKGMVPIDGEGSEACPNFKPAEKCGNCKN
FCNPDKYGLGTCTGLEKENWAYATCGASACPSYKAE
3D structure
PDB2yaj Structural Basis for a Kolbe-Type Decarboxylation Catalyzed by a Glycyl Radical Enzyme.
ChainD
Resolution1.813 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.1.83: 4-hydroxyphenylacetate decarboxylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 D H3 C6 N8 C19 A35 C36 F39 H3 C6 N8 C19 A35 C36 F39
BS02 SF4 D C45 C48 N50 F51 C62 C80 S82 Y83 C45 C48 N50 F51 C62 C80 S82 Y83
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0043722 4-hydroxyphenylacetate decarboxylase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:2yaj, PDBe:2yaj, PDBj:2yaj
PDBsum2yaj
PubMed21823587
UniProtQ38HX3|HPDS_CLOSL 4-hydroxyphenylacetate decarboxylase small subunit (Gene Name=csdC)

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