Structure of PDB 2wnr Chain D

Receptor sequence
>2wnrD (length=210) Species: 145262 (Methanothermobacter thermautotrophicus) [Search protein sequence]
VREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAVIR
CRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVF
IEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLS
EEEDKEGQADVPVAILPRTREITLLQSDGNLTPEEFERALDLAVEGCLRI
HEVQKEALRK
3D structure
PDB2wnr Structure of the Methanothermobacter Thermautotrophicus Exosome Rnase Ph Ring
ChainD
Resolution2.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.13.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PO4 D R97 G135 T136 R137 R71 G109 T110 R111
Gene Ontology
Molecular Function
GO:0000175 3'-5'-RNA exonuclease activity
GO:0004527 exonuclease activity
GO:0005515 protein binding
GO:0016896 RNA exonuclease activity, producing 5'-phosphomonoesters
Biological Process
GO:0006401 RNA catabolic process
GO:0016075 rRNA catabolic process
Cellular Component
GO:0000177 cytoplasmic exosome (RNase complex)
GO:0000178 exosome (RNase complex)
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2wnr, PDBe:2wnr, PDBj:2wnr
PDBsum2wnr
PubMed20445227
UniProtO26779|RRP41_METTH Exosome complex component Rrp41 (Gene Name=rrp41)

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