Structure of PDB 2vv8 Chain D

Receptor sequence
>2vv8D (length=107) Species: 375 (Bradyrhizobium japonicum) [Search protein sequence]
TIPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRH
DSYISRYRTTSDPHIIGIGRIVTGKRRDGTTFPMHLSIGEMQSGGEPYFT
GFVRDLT
3D structure
PDB2vv8 Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains.
ChainD
Resolution1.61 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.13.3: histidine kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM D L256 T257 L106 T107
BS02 HEM D I159 V188 L191 M192 D196 H200 Y203 Y207 H214 I215 I216 R220 V222 L236 I238 F249 G251 I9 V38 L41 M42 D46 H50 Y53 Y57 H64 I65 I66 R70 V72 L86 I88 F99 G101
BS03 CMO D I215 L236 I238 I65 L86 I88
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Biological Process
External links
PDB RCSB:2vv8, PDBe:2vv8, PDBj:2vv8
PDBsum2vv8
PubMed18942854
UniProtP23222|FIXL_BRADU Sensor protein FixL (Gene Name=fixL)

[Back to BioLiP]