Structure of PDB 2ivz Chain D

Receptor sequence
>2ivzD (length=387) Species: 562 (Escherichia coli) [Search protein sequence]
SGRPIGVVPFQWAGAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQE
VQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK
VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTFPYELRVSDYDG
YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV
ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN
NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADV
SSDGKFMVMVSSQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSS
SQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL
3D structure
PDB2ivz Competitive Recruitment of the Periplasmic Translocation Portal Tolb by a Natively Disordered Domain of Colicin E9
ChainD
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Q173 Y181 P202 M204 S205 F220 H246 A249 L269 T292 E293 T306 D308 P313 K423 F424 Q137 Y141 P162 M164 S165 F180 H206 A209 L229 T252 E253 T266 D268 P273 K379 F380
BS02 CA D D339 V340 D299 V300
Gene Ontology
Biological Process
GO:0015031 protein transport
GO:0017038 protein import
Cellular Component
GO:0042597 periplasmic space

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Biological Process
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Cellular Component
External links
PDB RCSB:2ivz, PDBe:2ivz, PDBj:2ivz
PDBsum2ivz
PubMed16894158
UniProtP0A855|TOLB_ECOLI Tol-Pal system protein TolB (Gene Name=tolB)

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