Structure of PDB 2fmy Chain D

Receptor sequence
>2fmyD (length=218) Species: 129958 (Carboxydothermus hydrogenoformans) [Search protein sequence]
ATQMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFL
VKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTRAFIQAMEDTTILYTDIR
NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQA
AMDTGLKVPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGILERV
NQRTLLLKDLQKLKEFSS
3D structure
PDB2fmy Crystal Structure of CO-sensing Transcription Activator CooA Bound to Exogenous Ligand Imidazole
ChainD
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM D Q3004 M3005 L3007 K3126 Q3 M4 L6 K125
BS02 IMD D M3005 V3118 M4 V117
BS03 HEM D I3078 F3079 C3080 H3082 T3083 R3084 I3100 F3103 M3117 I77 F78 C79 H81 T82 R83 I99 F102 M116
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:2fmy, PDBe:2fmy, PDBj:2fmy
PDBsum2fmy
PubMed17292914
UniProtQ3AB29

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