Structure of PDB 2b8h Chain D

Receptor sequence
>2b8hD (length=388) Species: 11320 (Influenza A virus) [Search protein sequence]
REFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRF
YALSQGTTIRGKHSNGTIHDRSQYRDLISWPLSSPPTVYNSRVECIGWSS
TSCHDGRARMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESEC
VCQNGVCPVVFTDGSATGPAETRIYYFKEGKILKWEPLTGTAKHIEECSC
YGEQAGVTCTCRDNWQGSNRPVIQIDPVAMTHTSQYICSPVLTDNPRPND
PTVGKCNDPYPGNNNNGVKGFSYLDGGNTWLGRTISVASRSGYEMLKVPN
ALTDDRSKPTQGQTIVLNTDWSGYSGSFMDYWAEGECYRACFYVELIRGR
PKEDKVWWTSNSIVSMCSSTEFLGQWNWPDGAKIEYFL
3D structure
PDB2b8h Structure of a calcium-deficient form of influenza virus neuraminidase: implications for substrate binding.
ChainD
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D151 E278 R293 R371 Y405
Catalytic site (residue number reindexed from 1) D70 E197 R212 R290 Y324
Enzyme Commision number 3.2.1.18: exo-alpha-sialidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BMA D L377 T391 G393 L296 T310 G312
BS02 MAN D D331 R364 K389 D250 R283 K308
BS03 MAN D R328 N330 R364 I366 V368 R247 N249 R283 I285 V287
Gene Ontology
Molecular Function
GO:0004308 exo-alpha-sialidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0046761 viral budding from plasma membrane
Cellular Component
GO:0016020 membrane
GO:0033644 host cell membrane
GO:0055036 virion membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2b8h, PDBe:2b8h, PDBj:2b8h
PDBsum2b8h
PubMed16929094
UniProtP05803|NRAM_I84A1 Neuraminidase (Gene Name=NA)

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