Structure of PDB 1z08 Chain D

Receptor sequence
>1z08D (length=166) Species: 9606 (Homo sapiens) [Search protein sequence]
YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKR
VNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL
RKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNK
GIEELFLDLCKRMIET
3D structure
PDB1z08 Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
ChainD
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG D M180 T183 M163 T166
BS02 GNP D G28 G31 K32 T33 S34 F44 N45 D46 H48 G77 N132 K133 D135 L136 S162 A163 K164 G11 G14 K15 T16 S17 F27 N28 D29 H31 G60 N115 K116 D118 L119 S145 A146 K147
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0032482 Rab protein signal transduction

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1z08, PDBe:1z08, PDBj:1z08
PDBsum1z08
PubMed16034420
UniProtQ9UL25|RAB21_HUMAN Ras-related protein Rab-21 (Gene Name=RAB21)

[Back to BioLiP]