Structure of PDB 1y0b Chain D

Receptor sequence
>1y0bD (length=194) Species: 1423 (Bacillus subtilis) [Search protein sequence]
SNAMEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFA
KDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVY
SFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASI
AGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQE
3D structure
PDB1y0b Crystal Structure of Xanthine Phosphoribosyltransferase from Bacillus subtilis
ChainD
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.4.2.22: xanthine phosphoribosyltransferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 G4P D R80 L85 R83 L88
BS02 G4P D L20 E58 S59 S60 K81 F126 K156 L23 E61 S62 S63 K84 F129 K159
Gene Ontology
Molecular Function
GO:0000310 xanthine phosphoribosyltransferase activity
GO:0016757 glycosyltransferase activity
GO:0016763 pentosyltransferase activity
Biological Process
GO:0006166 purine ribonucleoside salvage
GO:0032265 XMP salvage
GO:0043101 purine-containing compound salvage
GO:0046110 xanthine metabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1y0b, PDBe:1y0b, PDBj:1y0b
PDBsum1y0b
PubMed
UniProtP42085|XPT_BACSU Xanthine phosphoribosyltransferase (Gene Name=xpt)

[Back to BioLiP]