Structure of PDB 1t0m Chain D

Receptor sequence
>1t0mD (length=278) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRWEPPP
3D structure
PDB1t0m The structure of H-2K(b) and K(bm8) complexed to a herpes simplex virus determinant: evidence for a conformational switch that governs T cell repertoire selection and viral resistance.
ChainD
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 E24 E63 K66 N70 S73 F74 D77 Y84 Y116 T143 K146 W147 E152 R155 Y159 W167 Y171 Y7 E24 E63 K66 N70 S73 F74 D77 Y84 Y116 T143 K146 W147 E152 R155 Y159 W167 Y171
External links
PDB RCSB:1t0m, PDBe:1t0m, PDBj:1t0m
PDBsum1t0m
PubMed15210799
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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