Structure of PDB 1rzr Chain D

Receptor sequence
>1rzrD (length=332) Species: 1404 (Priestia megaterium) [Search protein sequence]
MNVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNA
VARGLASKKTTTVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSDQ
NQDKELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVVLAASIES
TNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGY
KRALTESGLPVRDSYIVEGDYTYDSGIEAVEKLLEEDEKPTAIFVGTDEM
ALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAV
AMRLLTKYMNKETVDSSIVQLPHRIEFRQSTK
3D structure
PDB1rzr Structural basis for allosteric control of the transcription regulator CcpA by the phosphoprotein HPr-Ser46-P.
ChainD
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D T4 I5 M16 S20 N24 Y46 P48 N49 A52 R53 A56 K58 T4 I5 M16 S20 N24 Y46 P48 N49 A52 R53 A56 K58
BS02 dna D S15 A17 T18 R21 N28 V29 K30 L55 A56 S15 A17 T18 R21 N28 V29 K30 L55 A56
BS03 MG D N101 D103 N101 D103
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1rzr, PDBe:1rzr, PDBj:1rzr
PDBsum1rzr
PubMed15369672
UniProtP46828|CCPA_PRIMG Catabolite control protein A (Gene Name=ccpA)

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