Structure of PDB 1rzo Chain D

Receptor sequence
>1rzoD (length=262) Species: 3988 (Ricinus communis) [Search protein sequence]
ADVCMDPEPIVRIVGRNGLCVDVTGEEFFDGNPIQLWPCKSNTDWNQLWT
LRKDSTIRSNGKCLTISKSSPRQQVVIYNCSTATVGATRWQIWDNRTIIN
PRSGLVLAATSGNSGTKLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGM
CLQANSGKVWLEDCTSEKAEQQWALYADGSIRPQQNRDNCLTTDANIKGT
VVKILSCGPASSGQRWMFKNDGTILNLYNGLVLDVRRSDPSLKQIIVHPF
HGNLNQIWLPLF
3D structure
PDB1rzo Structure-function investigation complex of Agglutinin from Ricinus communis with galactoaza
ChainD
Resolution2.63 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.2.22: rRNA N-glycosylase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GAL D W2093 N2095 W93 N95
BS02 GAL D I2010 N2135 I10 N135
External links
PDB RCSB:1rzo, PDBe:1rzo, PDBj:1rzo
PDBsum1rzo
PubMed
UniProtP06750|AGGL_RICCO Agglutinin

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