Structure of PDB 1par Chain D

Receptor sequence
>1parD (length=53) Species: 10754 (Lederbergvirus P22) [Search protein sequence]
MKGMSKMPQFNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGR
IGA
3D structure
PDB1par DNA recognition by beta-sheets in the Arc repressor-operator crystal structure.
ChainD
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D M1 G3 M4 S5 N11 R23 S32 V33 N34 M1 G3 M4 S5 N11 R23 S32 V33 N34
BS02 dna D Q9 F10 N11 R13 Q9 F10 N11 R13
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:1par, PDBe:1par, PDBj:1par
PDBsum1par
PubMed8107872
UniProtP03050|RARC_BPP22 Transcriptional repressor arc (Gene Name=arc)

[Back to BioLiP]