Structure of PDB 1nkw Chain D

Receptor sequence
>1nkwD (length=178) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
QQLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAID
KAAKELALITLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLE
KLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRG
MDITIVTTAKTDEEARALLQSMGLPFRK
3D structure
PDB1nkw High resolution structure of the large ribosomal subunit from a mesophilic eubacterium
ChainD
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D A27 V89 A26 V88
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1nkw, PDBe:1nkw, PDBj:1nkw
PDBsum1nkw
PubMed11733066
UniProtQ9RXJ0|RL5_DEIRA Large ribosomal subunit protein uL5 (Gene Name=rplE)

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