Structure of PDB 1n5a Chain D

Receptor sequence
>1n5aD (length=274) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRW
3D structure
PDB1n5a A Structural Basis for LCMV Immune Evasion. Subversion of H-2D(b) and H-2K(b) Presentation of gp33 Revealed by Comparative Crystal Structure Analyses.
ChainD
Resolution2.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 R62 E63 K66 Q70 W73 Y84 Q97 Y123 T143 K146 W147 S150 A152 H155 Y156 Y159 E163 W167 Y171 Y7 R62 E63 K66 Q70 W73 Y84 Q97 Y123 T143 K146 W147 S150 A152 H155 Y156 Y159 E163 W167 Y171
External links
PDB RCSB:1n5a, PDBe:1n5a, PDBj:1n5a
PDBsum1n5a
PubMed12479822
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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