Structure of PDB 1knz Chain D

Receptor sequence
>1knzD (length=138) Species: 10923 (Simian rotavirus A/SA11) [Search protein sequence]
GSMESTQQMAVSIINSSFEAAVVAATSALENMGIEYDYQDIYSRVKNKFD
FVMDDSGVKNNPIGKAITIDQALNDTSRPAKLDEDVNKLRMMLSSKGIDQ
KMRVLNACFSVKRIPGKSSSIIKCTKLMRDKLERGEVE
3D structure
PDB1knz Recognition of the rotavirus mRNA 3' consensus by an asymmetric NSP3 homodimer.
ChainD
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D D98 R105 R118 V119 K146 R149 D83 R90 R103 V104 K131 R134 PDBbind-CN: Kd=79nM
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:1knz, PDBe:1knz, PDBj:1knz
PDBsum1knz
PubMed11792322
UniProtP03536|NSP3_ROTS1 Non-structural protein 3

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