Structure of PDB 1jyi Chain D

Receptor sequence
>1jyiD (length=237) Species: 3823 (Canavalia ensiformis) [Search protein sequence]
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIK
SPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
3D structure
PDB1jyi Structural and Functional Consequences of Peptide-carbohydrate Mimicry. Crystal Structure of a Carbohydrate-mimicking Peptide Bound to Concanavalin A.
ChainD
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y22 P23 N41 M42 Q43 N44 K46 K200 S201 S204 H205 P206 Y22 P23 N41 M42 Q43 N44 K46 K200 S201 S204 H205 P206
BS02 MN D E8 D10 D19 H24 E8 D10 D19 H24
BS03 CA D D10 Y12 N14 D19 D10 Y12 N14 D19
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
GO:0090729 toxin activity
Biological Process
GO:0035821 modulation of process of another organism

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Molecular Function
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Biological Process
External links
PDB RCSB:1jyi, PDBe:1jyi, PDBj:1jyi
PDBsum1jyi
PubMed10821862
UniProtP55915|CONA_CANBR Concanavalin-Br

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